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MAÌSTAS
-
M
odeling and
A
ssessment of
IS
oforms
T
hrough
A
utomated
S
erver
Select the organism or the special FASTA format input
Homo sapiens genes (GRCh37)
FASTA format
Anolis carolinensis genes (AnoCar1.0)
Bos taurus genes (Btau_4.0)
Caenorhabditis elegans genes (WS210)
Callithrix jacchus genes (calJac3)
Canis familiaris genes (CanFam_2.0)
Cavia porcellus genes (cavPor3)
Choloepus hoffmanni genes (choHof1)
Ciona intestinalis genes (JGI2)
Ciona savignyi genes (CSAV2.0)
Danio rerio genes (Zv8)
Dasypus novemcinctus genes (dasNov2)
Dipodomys ordii genes (dipOrd1)
Drosophila melanogaster genes (BDGP5.13)
Echinops telfairi genes (TENREC)
Equus caballus genes (EquCab2)
Erinaceus europaeus genes (eriEur1)
Felis catus genes (CAT)
Gallus gallus genes (WASHUC2)
Gasterosteus aculeatus genes (BROADS1)
Gorilla gorilla genes (gorGor3)
Homo sapiens genes (GRCh37)
Loxodonta africana genes (loxAfr3)
Macaca mulatta genes (MMUL_1.0)
Macropus eugenii genes (Meug_1.0)
Microcebus murinus genes (micMur1)
Monodelphis domestica genes (monDom5)
Mus musculus genes (NCBIM37)
Myotis lucifugus genes (myoLuc1)
Ochotona princeps genes (OchPri2.0)
Ornithorhynchus anatinus genes (OANA5)
Oryctolagus cuniculus genes (oryCun2.0)
Oryzias latipes genes (HdrR)
Otolemur garnettii genes (otoGar1)
Pan troglodytes genes (CHIMP2.1)
Pongo pygmaeus abelii genes (PPYG2)
Procavia capensis genes (proCap1)
Pteropus vampyrus genes (pteVam1)
Rattus norvegicus genes (RGSC3.4)
Saccharomyces cerevisiae genes (SGD1.01)
Sorex araneus genes (sorAra1)
Spermophilus tridecemlineatus genes (speTri1)
Sus scrofa genes (Sscrofa9)
Taeniopygia guttata genes (taeGut3.2.4)
Takifugu rubripes genes (FUGU4.0)
Tarsius syrichta genes (tarSyr1)
Tetraodon nigroviridis genes (TETRAODON8.0)
Tupaia belangeri genes (tupBel1)
Tursiops truncatus genes (turTru1)
Vicugna pacos genes (vicPac1)
Xenopus tropicalis genes (JGI4.1)
Select the input type
Ensembl Gene ID(s)
Ensembl Transcript ID(s)
Ensembl protein ID(s)
EMBL ID(s)
EntrezGene ID(s)
HGNC automatic gene name
HGNC curated gene name
UniProt/TrEMBL Accession(s)
UniProt/Swissprot ID(s)
UniProt/Swissprot Accession(s)
VEGA Transcript ID(s) (OTTT)
HAVANA transcript (where ENST identical to OTTT)
Ensembl transcript (where OTTT shares CDS with ENST)
HAVANA transcript (where ENST shares CDS with OTTT)
Enter here accession code/s or isoforms sequence/s in special FASTA format
Restrictions
:
not more than 50 input IDs (or 150 isoforms in special fasta format
) per submission.
If you need to submit a large number of genes/isoforms to this server, please contact us by
e-mail
first.
Enter your e-mail address for job completion alert (optional):
MODELLER key (Not required but please read
here
)
Other Resources
ASPicDB
ProSAS
AS-ALPS
References
Floris M, Raimondo D, Leoni G, Orsini M, Marcatili P, Tramontano A.
MAISTAS: a tool for automatic structural evaluation of alternative splicing products
Bioinformatics, 2011 Apr 15.
Download pdf file
For further details contact floris[AT]crs4.it
last modified: May 23 2011.